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xingxu huang  (Addgene inc)


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    Structured Review

    Addgene inc xingxu huang
    Xingxu Huang, supplied by Addgene inc, used in various techniques. Bioz Stars score: 94/100, based on 168 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/xingxu+huang/pGL3-U6-sgRNA-PGK-puromycin+(Plasmid+%2351133)/pmc12884776-268-37-41
    Average 94 stars, based on 168 article reviews
    xingxu huang - by Bioz Stars, 2026-11
    94/100 stars

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    Related Articles

    Plasmid Preparation:

    Article Title: Generating a New sgRNA Vector, pGL3-U6-sgRNA-PGK-mRFP-T2A-PuroR, to Improve Base Editing
    Article Snippet: Unless otherwise specified, DNA primers ( ) were designed using ApE (A plasmid Editor; by M. Wayne Davis) and custom made (Sigma). .. MCS1-EF1α-RFP-T2A-Puro-pA-MCS2 was purchased from System Biosciences (# HR110PA-1). pGL3-U6-sgRNA-PGK-puromycin was a gift from Xingxu Huang (Addgene plasmid #51133), whereas pCMV_BE4max was a gift from David Liu (Addgene plasmid #112093) [ 12 , 14 ]. .. Plasmids were isolated using QiAprep Spin Miniprep kit (Qiagen) by following the manufacturer’s protocol.

    Article Title: PIBF1 regulates trophoblast syncytialization and promotes cardiovascular development
    Article Snippet: To generate single guide RNAs (sgRNAs) used for floxed PIBF1 mice, the following oligomers were purchased from Macrogen, Inc.: 5′−taggGCTATTTCAGTTTCTCTAAG−3′ and 5′−aaacCTTAGAGAAACTGAAATAGC−3′ for Pibf1 intron 1-specific sgRNA; 5′−taggACTCTATTTCTGCTTCCCGA−3′ and 5′−aaacTCGGGAAGCAGAAATAGAGT−3′ for Pibf1 intron 17-specific sgRNA. .. Each pair of oligomers was annealed and cloned into pUC57-sgRNA vector, a gift from Xingxu Huang (Addgene plasmid # 51132; http://n2t.net/addgene:51132;RRID:Addgene_51132 ), using BsaI restriction enzymes (New England BioLabs), and the cloned vectors were used as a template for sgRNA in vitro transcription. .. The following single-stranded deoxynucleotide donor DNAs were purchased from Integrated DNA Technologies, Inc.: 5′−tgtaactcccttgtttaaatacgacacgatttagtaaaatagttatagaactagctatttcagtttctctATAACTTCGTATAATGTATGCTATACGAAGTTATaagaggaacgctaaagaaggaggtctgtgtggtgggggggaacaggaagagcttcagtacaatccgcctc−3′ for inserting a loxP into Pibf1 intron 1; 5′−caattctcctccttcaatatattgtgaatttctgttgaactgtgaaacagataactctatttctgcttccATAACTTCGTATAATGTATGCTATACGAAGTTATcgagggctgaaattacaaccatgaaccaccatacccaggtgaaactatttttttttagagatataacata−3′ for inserting a loxP into Pibf1 intron 17.

    Article Title: m 5 C methylated lncRncr3 –MeCP2 interaction restricts miR124a- initiated neurogenesis
    Article Snippet: The beads were pelleted by magnet and the supernatant subjected to protein size-separation in 4–20% Mini-PROTEAN® TGXTM Precast Protein Gels (Bio-Rad) and used for western blot experiments. .. To express appropriate sgRNAs in NE-4C cells for deletion of Rncr3 exons 2/3 or for Rncr3 full length KO, the pGL3 vector (Supplementary Table ) with the U6 promoter was used and co-transfected with pCAS9 into cells. pGL3-U6-sgRNA-PGK-puromycin was a gift from Xingxu Huang (Addgene plasmid # 51133; http://n2t.net/addgene:51133 ; RRID: Addgene_51133) and pCas9_GFP was a gift from Kiran Musunuru (Addgene plasmid # 44719; http://n2t.net/addgene:44719 ; RRID: Addgene_44719). .. For in vivo RNA pull-down assays and MeCP2-eGFP RIP experiments, cells were transfected with plasmids expressing eGFP fused with wild-type (pEGFP-N1_MeCP2(WT), gift from Adrian Bird ; Addgene plasmid # 110186; http://n2t.net/addgene:110186 ; RRID: Addgene_110186) or other MeCP2 mutants (Supplementary Tables and ).

    Article Title: Effectiveness of Multivitamins vs Folic Acid on Prevention of Neural Tube Defects in Mouse Genetic Models and Human Organoids
    Article Snippet: .. To express appropriate sgRNAs in human iPS cells for deletion of the HAT domain of hGCN5 , the pGL3 vector with the U6 promoter was used and co‐transfected with pCAS9 into cells. pGL3‐U6‐sgRNA‐PGK‐puromycin was a gift from Xingxu Huang [ ] (Addgene plasmid # 51133; http://n2t.net/addgene:51133; RRID: Addgene_51133) and pCas9_GFP was a gift from Kiran Musunuru [ ] (Addgene plasmid # 44719; http://n2t.net/addgene:44719; RRID: Addgene_44719). ..

    Article Title: Plxnd1-mediated mechanosensing of blood flow controls the caliber of the Dorsal Aorta via the transcription factor Klf2
    Article Snippet: Michel Bagnat ( TgKI(tjp1a-eGFP) pd1252 )[ ], the Zebrafish International Resource Center/ZIRC ( gata1a m651 , klf2b sa43252 , and sih tc300b ). .. Vectors : Chi-Bin Chien and Koichi Kawakami (pCS2FA-transposase, pDestTol2CG2, and p3E-polyA,)[ ], Nathan Lawson (p5E-fliep)[ ], Salim Abdelilah-Seyfried (pME-klf2a)[ ], and Xingxu Huang (pST1374-NLS-flag-linker-Cas9; Addgene plasmid #44758)[ ]. .. Zebrafish confocal imaging was done at the NYU Grossman School of Medicine’s Microscopy Laboratory (partially supported by the NIH’s NCI grant P30CA016087) using a Leica SP8 confocal system (supported by the NIH’s NCRR grant 1S10RR024708).

    Article Title: Comparison of ICSI, IVF, and in vivo derived embryos to produce CRISPR-Cas9 gene-edited pigs for xenotransplantation.
    Article Snippet: Genome editing in pigs for xenotransplantation has seen significant advances in recent years.. This study compared three methodologies to generate gene-edited embryos, including co-injection of sperm together with the CRISPR-Cas9 system into oocytes, named ICSI-MGE (mediated gene editing); microinjection of CRISPR-Cas9 components into oocytes followed by in vitro fertilization (IVF), and microinjection of in vivo fertilized zygotes with the CRISPR-Cas9 system.. Our goal was to knock-out (KO) porcine genes involved in the biosynthesis of xenoantigens responsible for the hyperacute rejection of interspecific xenografts, namely GGTA1, CMAH, and β4GalNT2.

    Clone Assay:

    Article Title: PIBF1 regulates trophoblast syncytialization and promotes cardiovascular development
    Article Snippet: To generate single guide RNAs (sgRNAs) used for floxed PIBF1 mice, the following oligomers were purchased from Macrogen, Inc.: 5′−taggGCTATTTCAGTTTCTCTAAG−3′ and 5′−aaacCTTAGAGAAACTGAAATAGC−3′ for Pibf1 intron 1-specific sgRNA; 5′−taggACTCTATTTCTGCTTCCCGA−3′ and 5′−aaacTCGGGAAGCAGAAATAGAGT−3′ for Pibf1 intron 17-specific sgRNA. .. Each pair of oligomers was annealed and cloned into pUC57-sgRNA vector, a gift from Xingxu Huang (Addgene plasmid # 51132; http://n2t.net/addgene:51132;RRID:Addgene_51132 ), using BsaI restriction enzymes (New England BioLabs), and the cloned vectors were used as a template for sgRNA in vitro transcription. .. The following single-stranded deoxynucleotide donor DNAs were purchased from Integrated DNA Technologies, Inc.: 5′−tgtaactcccttgtttaaatacgacacgatttagtaaaatagttatagaactagctatttcagtttctctATAACTTCGTATAATGTATGCTATACGAAGTTATaagaggaacgctaaagaaggaggtctgtgtggtgggggggaacaggaagagcttcagtacaatccgcctc−3′ for inserting a loxP into Pibf1 intron 1; 5′−caattctcctccttcaatatattgtgaatttctgttgaactgtgaaacagataactctatttctgcttccATAACTTCGTATAATGTATGCTATACGAAGTTATcgagggctgaaattacaaccatgaaccaccatacccaggtgaaactatttttttttagagatataacata−3′ for inserting a loxP into Pibf1 intron 17.

    Article Title: Comparison of ICSI, IVF, and in vivo derived embryos to produce CRISPR-Cas9 gene-edited pigs for xenotransplantation.
    Article Snippet: Genome editing in pigs for xenotransplantation has seen significant advances in recent years.. This study compared three methodologies to generate gene-edited embryos, including co-injection of sperm together with the CRISPR-Cas9 system into oocytes, named ICSI-MGE (mediated gene editing); microinjection of CRISPR-Cas9 components into oocytes followed by in vitro fertilization (IVF), and microinjection of in vivo fertilized zygotes with the CRISPR-Cas9 system.. Our goal was to knock-out (KO) porcine genes involved in the biosynthesis of xenoantigens responsible for the hyperacute rejection of interspecific xenografts, namely GGTA1, CMAH, and β4GalNT2.

    In Vitro:

    Article Title: PIBF1 regulates trophoblast syncytialization and promotes cardiovascular development
    Article Snippet: To generate single guide RNAs (sgRNAs) used for floxed PIBF1 mice, the following oligomers were purchased from Macrogen, Inc.: 5′−taggGCTATTTCAGTTTCTCTAAG−3′ and 5′−aaacCTTAGAGAAACTGAAATAGC−3′ for Pibf1 intron 1-specific sgRNA; 5′−taggACTCTATTTCTGCTTCCCGA−3′ and 5′−aaacTCGGGAAGCAGAAATAGAGT−3′ for Pibf1 intron 17-specific sgRNA. .. Each pair of oligomers was annealed and cloned into pUC57-sgRNA vector, a gift from Xingxu Huang (Addgene plasmid # 51132; http://n2t.net/addgene:51132;RRID:Addgene_51132 ), using BsaI restriction enzymes (New England BioLabs), and the cloned vectors were used as a template for sgRNA in vitro transcription. .. The following single-stranded deoxynucleotide donor DNAs were purchased from Integrated DNA Technologies, Inc.: 5′−tgtaactcccttgtttaaatacgacacgatttagtaaaatagttatagaactagctatttcagtttctctATAACTTCGTATAATGTATGCTATACGAAGTTATaagaggaacgctaaagaaggaggtctgtgtggtgggggggaacaggaagagcttcagtacaatccgcctc−3′ for inserting a loxP into Pibf1 intron 1; 5′−caattctcctccttcaatatattgtgaatttctgttgaactgtgaaacagataactctatttctgcttccATAACTTCGTATAATGTATGCTATACGAAGTTATcgagggctgaaattacaaccatgaaccaccatacccaggtgaaactatttttttttagagatataacata−3′ for inserting a loxP into Pibf1 intron 17.

    other:

    Article Title: PIBF1 regulates trophoblast syncytialization and promotes cardiovascular development.
    Article Snippet: After 48 h, the cultured cells were stained with Hoechst 33342 (H1399, Invitrogen) and 2μM Di-8-ANEPPS (D3167, Invitrogen) for 30min, and subsequently imaged by Zeiss LSM 880 Fast Airyscan Confocal system (Carl Zeiss, Jena, Germany).

    Article Title: RepFluo, a Fast Fluorescent In Vitro Assay of Cas9 Activity Exploiting Melting Curve Analysis
    Article Snippet: Immediately before use, the protein was diluted in PBS (Merk, Sigma-Aldrich).

    HAT Assay:

    Article Title: Effectiveness of Multivitamins vs Folic Acid on Prevention of Neural Tube Defects in Mouse Genetic Models and Human Organoids
    Article Snippet: .. To express appropriate sgRNAs in human iPS cells for deletion of the HAT domain of hGCN5 , the pGL3 vector with the U6 promoter was used and co‐transfected with pCAS9 into cells. pGL3‐U6‐sgRNA‐PGK‐puromycin was a gift from Xingxu Huang [ ] (Addgene plasmid # 51133; http://n2t.net/addgene:51133; RRID: Addgene_51133) and pCas9_GFP was a gift from Kiran Musunuru [ ] (Addgene plasmid # 44719; http://n2t.net/addgene:44719; RRID: Addgene_44719). ..

    Expressing:

    Article Title: Comparison of ICSI, IVF, and in vivo derived embryos to produce CRISPR-Cas9 gene-edited pigs for xenotransplantation.
    Article Snippet: Genome editing in pigs for xenotransplantation has seen significant advances in recent years.. This study compared three methodologies to generate gene-edited embryos, including co-injection of sperm together with the CRISPR-Cas9 system into oocytes, named ICSI-MGE (mediated gene editing); microinjection of CRISPR-Cas9 components into oocytes followed by in vitro fertilization (IVF), and microinjection of in vivo fertilized zygotes with the CRISPR-Cas9 system.. Our goal was to knock-out (KO) porcine genes involved in the biosynthesis of xenoantigens responsible for the hyperacute rejection of interspecific xenografts, namely GGTA1, CMAH, and β4GalNT2.



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    94
    Addgene inc xingxu huang
    Xingxu Huang, supplied by Addgene inc, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/xingxu+huang/pGL3-U6-sgRNA-PGK-puromycin+(Plasmid+%2351133)/pmc12884776-268-37-41
    Average 94 stars, based on 1 article reviews
    xingxu huang - by Bioz Stars, 2026-11
    94/100 stars
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